SNP Information
SNP |
Name |
Pav_sc0001030.1_168387S |
REF |
C |
ALT |
G |
Chromosome |
Name |
PAV_r1.0chr1 |
Position |
27188955 |
PAV_r1.0 |
Name |
Pav_sc0001030.1 |
Position |
168387 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.168387C>G |
Amino Acid |
|
PCR |
Forward primer |
GATGGCTTTTTCCCCAATTT |
Reverse primer |
GACATCACAAAACTCGGGCT |
Product size |
345 |
Enzymes for CAPS |
HhaI |
Exp. fragment size (REF) |
196,54,95 |
Exp. fragment size (ALT) |
196,5,49,95 |
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
ALT/ALT |
Benishuho |
REF/ALT |
Benitemari |
-/- |
Beniyutaka |
REF/REF |
Nanyo |
ALT/ALT |
Satonishiki |
REF/ALT |