SNP Information
SNP |
Name |
Pav_sc0001025.1_181458R |
REF |
G |
ALT |
A |
Chromosome |
Name |
PAV_r1.0chr8 |
Position |
2586899 |
PAV_r1.0 |
Name |
Pav_sc0001025.1 |
Position |
181458 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.181458G>A |
Amino Acid |
|
PCR |
Forward primer |
CTCGATTGTCAACGCATAGC |
Reverse primer |
TTCAGCTCATTCGATTTCTTCA |
Product size |
297 |
Enzymes for CAPS |
AfaI |
Exp. fragment size (REF) |
105,33,52,107 |
Exp. fragment size (ALT) |
105,33,159 |
References |
|
Germplasm List
Benikirari |
REF/REF |
Benisayaka |
REF/REF |
Benishuho |
REF/REF |
Benitemari |
REF/REF |
Beniyutaka |
REF/ALT |
Nanyo |
REF/REF |
Satonishiki |
REF/REF |