| SNP | Name | Pav_sc0001009.1_228798R |
|---|---|---|
| REF | G | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr8 |
| Position | 12867595 | |
| PAV_r1.0 | Name | Pav_sc0001009.1 |
| Position | 228798 | |
| SSR | motif | |
| Gene | Name | Pav_sc0001009.1_g330.1.mk |
| Annotation | ||
| snpEff | Effect | 5_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.-75G>A | |
| Amino Acid | ||
| PCR | Forward primer | CACTTTTGATCTCCTTCCGC |
| Reverse primer | GGAAGCAAGCCTTGTGGTAA | |
| Product size | 308 | |
| Enzymes for CAPS | AluI | |
| Exp. fragment size (REF) | 117,53,138 | |
| Exp. fragment size (ALT) | 117,53,66,72 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |