| SNP | Name | Pav_sc0000907.1_115798R |
|---|---|---|
| REF | A | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr6 |
| Position | 21515703 | |
| PAV_r1.0 | Name | Pav_sc0000907.1 |
| Position | 115798 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000907.1_g240.1.mk |
| Annotation | PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.1271T>C | |
| Amino Acid | p.Met424Thr | |
| PCR | Forward primer | GCAGTGCAGTTTCCTTCTCC |
| Reverse primer | ACATTTATGCAAAGGCAGGC | |
| Product size | 273 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | -/- |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |