| SNP | Name | Pav_sc0000886.1_420289Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr5 |
| Position | 8867973 | |
| PAV_r1.0 | Name | Pav_sc0000886.1 |
| Position | 420289 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000886.1_g780.1.mk |
| Annotation | PREDICTED: endoglucanase-like | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.1128+67G>A | |
| Amino Acid | ||
| PCR | Forward primer | TCATCGGGATCGATTTTCTC |
| Reverse primer | CAAGCTCTACCCTGGTGCTC | |
| Product size | 276 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |