SNP Information
SNP |
Name |
Pav_sc0000886.1_110653K |
REF |
G |
ALT |
T |
Chromosome |
Name |
PAV_r1.0chr5 |
Position |
8558337 |
PAV_r1.0 |
Name |
Pav_sc0000886.1 |
Position |
110653 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.110653G>T |
Amino Acid |
|
PCR |
Forward primer |
GGTCGAAAGAATTTGCGAAG |
Reverse primer |
CGGTGATGGGATCTTCAACT |
Product size |
296 |
Enzymes for CAPS |
HhaI |
Exp. fragment size (REF) |
182,114 |
Exp. fragment size (ALT) |
296 |
References |
|
Germplasm List
Benikirari |
ALT/ALT |
Benisayaka |
REF/ALT |
Benishuho |
-/- |
Benitemari |
REF/ALT |
Beniyutaka |
ALT/ALT |
Nanyo |
REF/ALT |
Satonishiki |
REF/ALT |