| SNP | Name | Pav_sc0000852.1_541630Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 32243042 | |
| PAV_r1.0 | Name | Pav_sc0000852.1 |
| Position | 541630 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000852.1_g910.1.mk |
| Annotation | PREDICTED: thioredoxin-like 4, chloroplastic | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.357G>A | |
| Amino Acid | p.Glu119Glu | |
| PCR | Forward primer | GGCACACAAAGACAACCCTT |
| Reverse primer | TCAGAATTCTCGAAACGGCT | |
| Product size | 341 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |