| SNP | Name | Pav_sc0000852.1_317061Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 32018473 | |
| PAV_r1.0 | Name | Pav_sc0000852.1 |
| Position | 317061 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000852.1_g510.1.mk |
| Annotation | PREDICTED: long chain base biosynthesis protein 1 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.1431+545T>C | |
| Amino Acid | ||
| PCR | Forward primer | CCCTTTTAGTGGGAATGAAGG |
| Reverse primer | GGCCTTTTGCTTGGTTTGTA | |
| Product size | 322 | |
| Enzymes for CAPS | HhaI | |
| Exp. fragment size (REF) | 322 | |
| Exp. fragment size (ALT) | 193,129 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/ALT |
| Benitemari | -/- |
| Beniyutaka | -/- |
| Nanyo | ALT/ALT |
| Satonishiki | REF/REF |