| SNP | Name | Pav_sc0000800.1_642559Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 33207223 | |
| PAV_r1.0 | Name | Pav_sc0000800.1 |
| Position | 642559 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000800.1_g1090.1.mk |
| Annotation | PREDICTED: branched-chain-amino-acid aminotransferase-like protein 3, chloroplastic | |
| snpEff | Effect | 3_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.*292A>G | |
| Amino Acid | ||
| PCR | Forward primer | TTTTCGATGCTTTATCGGCT |
| Reverse primer | TGTCGTCCGGTTGTACTTTG | |
| Product size | 329 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |