| SNP | Name | Pav_sc0000800.1_625470Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 33190134 | |
| PAV_r1.0 | Name | Pav_sc0000800.1 |
| Position | 625470 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000800.1_g1060.1.mk |
| Annotation | PREDICTED: protein tesmin/TSO1-like CXC 5 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.2615-326T>C | |
| Amino Acid | ||
| PCR | Forward primer | TCGTTCTAAGGCTGCCAAGT |
| Reverse primer | GGAATATTTTGGCACGCTGT | |
| Product size | 263 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | ALT/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |