| SNP | Name | Pav_sc0000759.1_260278Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 3814645 | |
| PAV_r1.0 | Name | Pav_sc0000759.1 |
| Position | 260278 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000759.1_g440.1.mk |
| Annotation | PREDICTED: ATP-dependent zinc metalloprotease FtsH | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.2271T>C | |
| Amino Acid | p.Ala757Ala | |
| PCR | Forward primer | GGATTTGAGGAAGCTTTTGC |
| Reverse primer | ATTGAGTCGATCTGCAACCC | |
| Product size | 319 | |
| Enzymes for CAPS | HaeIII | |
| Exp. fragment size (REF) | 264,55 | |
| Exp. fragment size (ALT) | 212,52,55 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/REF |