| SNP | Name | Pav_sc0000754.1_61477Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr5 |
| Position | 9281932 | |
| PAV_r1.0 | Name | Pav_sc0000754.1 |
| Position | 61477 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000754.1_g100.1.mk |
| Annotation | PREDICTED: putative glucose-6-phosphate 1-epimerase | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.187-97T>C | |
| Amino Acid | ||
| PCR | Forward primer | CTTTCCTGGAGGACTGAACG |
| Reverse primer | TTGGTGGCTTAAAGATTGCC | |
| Product size | 290 | |
| Enzymes for CAPS | MboI | |
| Exp. fragment size (REF) | 172,63,55 | |
| Exp. fragment size (ALT) | 235,55 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |