| SNP | Name | Pav_sc0000751.1_38943S |
|---|---|---|
| REF | C | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr7 |
| Position | 2623641 | |
| PAV_r1.0 | Name | Pav_sc0000751.1 |
| Position | 38943 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000751.1_g100.1.mk |
| Annotation | PREDICTED: photosynthetic NDH subunit of subcomplex B 2, chloroplastic | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.148G>C | |
| Amino Acid | p.Ala50Pro | |
| PCR | Forward primer | ACTCCATGGCCACTGAACTC |
| Reverse primer | CCCCTGAAAGCAGTCAAAAA | |
| Product size | 329 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | ALT/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |