SNP Information
SNP |
Name |
Pav_sc0000700.1_814527M |
REF |
C |
ALT |
A |
Chromosome |
Name |
PAV_r1.0chr6 |
Position |
23050161 |
PAV_r1.0 |
Name |
Pav_sc0000700.1 |
Position |
814527 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.814527C>A |
Amino Acid |
|
PCR |
Forward primer |
GTTCCGGATGTTCTCCTTGA |
Reverse primer |
GTGGCCACCATTATTGTTCC |
Product size |
215 |
Enzymes for CAPS |
AfaI |
Exp. fragment size (REF) |
71,144 |
Exp. fragment size (ALT) |
215 |
References |
|
Germplasm List
Benikirari |
ALT/ALT |
Benisayaka |
REF/ALT |
Benishuho |
REF/ALT |
Benitemari |
REF/ALT |
Beniyutaka |
REF/ALT |
Nanyo |
ALT/ALT |
Satonishiki |
REF/ALT |