| SNP | Name | Pav_sc0000691.1_119693Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 37136312 | |
| PAV_r1.0 | Name | Pav_sc0000691.1 |
| Position | 119693 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000691.1_g200.1.mk |
| Annotation | PREDICTED: TPR repeat-containing thioredoxin TTL1 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.377-56A>G | |
| Amino Acid | ||
| PCR | Forward primer | GTTCCCCAACTGTCCTGAAA |
| Reverse primer | AAGCCAAATCAAGGTGTTGC | |
| Product size | 238 | |
| Enzymes for CAPS | HaeIII | |
| Exp. fragment size (REF) | 238 | |
| Exp. fragment size (ALT) | 68,170 | |
| References | ||
| Benikirari | -/- |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | ALT/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |