| SNP | Name | Pav_sc0000666.1_15588Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr6 |
| Position | 15461481 | |
| PAV_r1.0 | Name | Pav_sc0000666.1 |
| Position | 15588 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000666.1_g040.1.mk |
| Annotation | PREDICTED: peptidyl-prolyl cis-trans isomerase-like 2 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.804+60T>C | |
| Amino Acid | ||
| PCR | Forward primer | TCAGTGCATGGAAGAAGTGC |
| Reverse primer | GTGAAGGATCTCGAAGCAGC | |
| Product size | 316 | |
| Enzymes for CAPS | AfaI | |
| Exp. fragment size (REF) | 316 | |
| Exp. fragment size (ALT) | 169,147 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |