| SNP | Name | Pav_sc0000666.1_15486W |
|---|---|---|
| REF | A | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr6 |
| Position | 15461583 | |
| PAV_r1.0 | Name | Pav_sc0000666.1 |
| Position | 15486 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000666.1_g040.1.mk |
| Annotation | PREDICTED: peptidyl-prolyl cis-trans isomerase-like 2 | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.762A>T | |
| Amino Acid | p.Ala254Ala | |
| PCR | Forward primer | CTGCTTCTGCTTCAGTGCAT |
| Reverse primer | CAGGATCAAAGGCGGTAGAA | |
| Product size | 347 | |
| Enzymes for CAPS | AluI | |
| Exp. fragment size (REF) | 69,278 | |
| Exp. fragment size (ALT) | 69,9,269 | |
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |