| SNP | Name | Pav_sc0000653.1_41271R |
|---|---|---|
| REF | A | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr6 |
| Position | 16924283 | |
| PAV_r1.0 | Name | Pav_sc0000653.1 |
| Position | 41271 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000653.1_g080.1.mk |
| Annotation | PREDICTED: E3 ubiquitin-protein ligase UPL4 | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.2331T>C | |
| Amino Acid | p.Tyr777Tyr | |
| PCR | Forward primer | GTGGTTGGTTCTTTTCGCAT |
| Reverse primer | ATTTGAGGTGTTTGCAAGGC | |
| Product size | 340 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |