SNP Information
SNP |
Name |
Pav_sc0000615.1_45025M |
REF |
C |
ALT |
A |
Chromosome |
Name |
PAV_r1.0chr3 |
Position |
16809072 |
PAV_r1.0 |
Name |
Pav_sc0000615.1 |
Position |
45025 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.45025C>A |
Amino Acid |
|
PCR |
Forward primer |
GGAATTGTGGAAAGAAGGCA |
Reverse primer |
AAGCAGGTTCTTTGGAGGGT |
Product size |
206 |
Enzymes for CAPS |
MboI |
Exp. fragment size (REF) |
124,82 |
Exp. fragment size (ALT) |
206 |
References |
|
Germplasm List
Benikirari |
ALT/ALT |
Benisayaka |
REF/REF |
Benishuho |
REF/REF |
Benitemari |
REF/ALT |
Beniyutaka |
REF/ALT |
Nanyo |
REF/ALT |
Satonishiki |
REF/REF |