| SNP | Name | Pav_sc0000600.1_77599Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 6217567 | |
| PAV_r1.0 | Name | Pav_sc0000600.1 |
| Position | 77599 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000600.1_g130.1.mk |
| Annotation | PREDICTED: cellulose synthase-like protein D3 | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.1474G>A | |
| Amino Acid | p.Ala492Thr | |
| PCR | Forward primer | ACCTTGGAATTCTGCCACTC |
| Reverse primer | TGTTGCTGCAGTGGTTTCTC | |
| Product size | 210 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | ALT/ALT |
| Satonishiki | REF/REF |