SNP Information
| SNP |
Name |
Pav_sc0000586.1_263599S |
| REF |
C |
| ALT |
G |
| Chromosome |
Name |
PAV_r1.0chr2 |
| Position |
17056494 |
| PAV_r1.0 |
Name |
Pav_sc0000586.1 |
| Position |
263599 |
| SSR |
motif |
|
| Gene |
Name |
|
| Annotation |
|
| snpEff |
Effect |
intergenic_region |
| Impact |
MODIFIER |
| Codon |
n.263599C>G |
| Amino Acid |
|
| PCR |
Forward primer |
ACTATTGTGAACCCCCTCCC |
| Reverse primer |
GTGGTTGCACTGACAAGGAA |
| Product size |
257 |
| Enzymes for CAPS |
|
| Exp. fragment size (REF) |
|
| Exp. fragment size (ALT) |
|
| References |
|
Germplasm List
| Benikirari |
ALT/ALT |
| Benisayaka |
REF/ALT |
| Benishuho |
REF/ALT |
| Benitemari |
REF/ALT |
| Beniyutaka |
ALT/ALT |
| Nanyo |
REF/ALT |
| Satonishiki |
REF/ALT |