SNP Information
SNP |
Name |
Pav_sc0000583.1_72933R |
REF |
A |
ALT |
G |
Chromosome |
Name |
PAV_r1.0chr8 |
Position |
18446355 |
PAV_r1.0 |
Name |
Pav_sc0000583.1 |
Position |
72933 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.72933A>G |
Amino Acid |
|
PCR |
Forward primer |
ACAGGAAAATGTACGGCTGG |
Reverse primer |
TCCAAAATTTGCACAGCAAG |
Product size |
272 |
Enzymes for CAPS |
AfaI |
Exp. fragment size (REF) |
12,51,89,120 |
Exp. fragment size (ALT) |
12,51,209 |
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
REF/REF |
Benishuho |
REF/ALT |
Benitemari |
REF/ALT |
Beniyutaka |
REF/REF |
Nanyo |
REF/ALT |
Satonishiki |
REF/ALT |