| SNP | Name | Pav_sc0000554.1_60334Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr2 |
| Position | 20540047 | |
| PAV_r1.0 | Name | Pav_sc0000554.1 |
| Position | 60334 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000554.1_g160.1.br |
| Annotation | PREDICTED: cucumisin-like | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.1525G>A | |
| Amino Acid | p.Gly509Arg | |
| PCR | Forward primer | AGCTACTCTTGTGCCCGGTA |
| Reverse primer | TCCAATCCGCTCTTATCACC | |
| Product size | 311 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |