SNP Information
SNP |
Name |
Pav_sc0000554.1_294724R |
REF |
A |
ALT |
G |
Chromosome |
Name |
PAV_r1.0chr2 |
Position |
20305657 |
PAV_r1.0 |
Name |
Pav_sc0000554.1 |
Position |
294724 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.294724A>G |
Amino Acid |
|
PCR |
Forward primer |
AGCAATAATGGGCCATGTTC |
Reverse primer |
TGGTTGAAAATGAGAGTGAATCC |
Product size |
239 |
Enzymes for CAPS |
MboI |
Exp. fragment size (REF) |
136,103 |
Exp. fragment size (ALT) |
239 |
References |
|
Germplasm List
Benikirari |
ALT/ALT |
Benisayaka |
REF/ALT |
Benishuho |
REF/ALT |
Benitemari |
ALT/ALT |
Beniyutaka |
REF/ALT |
Nanyo |
ALT/ALT |
Satonishiki |
REF/ALT |