| SNP | Name | Pav_sc0000553.1_82652W |
|---|---|---|
| REF | A | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 25143145 | |
| PAV_r1.0 | Name | Pav_sc0000553.1 |
| Position | 82652 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000553.1_g140.1.mk |
| Annotation | PREDICTED: callose synthase 5-like | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.-1734+104T>A | |
| Amino Acid | ||
| PCR | Forward primer | AGTTGAAAGGCATGCAAAGG |
| Reverse primer | TCATCCCAAACCTGAACCTC | |
| Product size | 304 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | ALT/ALT |
| Benitemari | ALT/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |