| SNP | Name | Pav_sc0000549.1_79304R |
|---|---|---|
| REF | G | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr5 |
| Position | 5591921 | |
| PAV_r1.0 | Name | Pav_sc0000549.1 |
| Position | 79304 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000549.1_g180.1.mk |
| Annotation | hypothetical protein POPTR_0003s08220g | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.540+181G>A | |
| Amino Acid | ||
| PCR | Forward primer | TTGTAGGGCATTGTTGGCTT |
| Reverse primer | GCAATGCCTGTCTAGGAGGA | |
| Product size | 323 | |
| Enzymes for CAPS | XbaI | |
| Exp. fragment size (REF) | 185,138 | |
| Exp. fragment size (ALT) | 185,44,94 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |