SNP Information
SNP |
Name |
Pav_sc0000549.1_72356Y |
REF |
C |
ALT |
T |
Chromosome |
Name |
PAV_r1.0chr5 |
Position |
5584973 |
PAV_r1.0 |
Name |
Pav_sc0000549.1 |
Position |
72356 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.72356C>T |
Amino Acid |
|
PCR |
Forward primer |
AAGCAATATGTCCCAGGTCG |
Reverse primer |
AATTAACCACGCATTGGTGC |
Product size |
344 |
Enzymes for CAPS |
EcoRI |
Exp. fragment size (REF) |
108,236 |
Exp. fragment size (ALT) |
87,21,236 |
References |
|
Germplasm List
Benikirari |
REF/REF |
Benisayaka |
REF/REF |
Benishuho |
REF/ALT |
Benitemari |
REF/ALT |
Beniyutaka |
REF/ALT |
Nanyo |
REF/ALT |
Satonishiki |
REF/ALT |