| SNP | Name | Pav_sc0000506.1_220435Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 4093876 | |
| PAV_r1.0 | Name | Pav_sc0000506.1 |
| Position | 220435 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000506.1_g340.1.mk |
| Annotation | hypothetical protein PRUPE_ppa018497mg, partial | |
| snpEff | Effect | 3_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.*300G>A | |
| Amino Acid | ||
| PCR | Forward primer | AGTGCCAGAACCCAGCTCTA |
| Reverse primer | ATCGACCCCTTTCGTTCTTT | |
| Product size | 254 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |