| SNP | Name | Pav_sc0000496.1_297778W |
|---|---|---|
| REF | T | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr7 |
| Position | 7028592 | |
| PAV_r1.0 | Name | Pav_sc0000496.1 |
| Position | 297778 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000496.1_g570.1.br |
| Annotation | ||
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.379A>T | |
| Amino Acid | p.Ser127Cys | |
| PCR | Forward primer | CTCGATCGTCTTCGTGTTCA |
| Reverse primer | GAATGGTCCCACCAATCAAG | |
| Product size | 317 | |
| Enzymes for CAPS | AluI | |
| Exp. fragment size (REF) | 130,36,131,20 | |
| Exp. fragment size (ALT) | 166,131,20 | |
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/REF |
| Satonishiki | REF/ALT |