SNP Information
SNP |
Name |
Pav_sc0000491.1_494746M |
REF |
A |
ALT |
C |
Chromosome |
Name |
PAV_r1.0chr2 |
Position |
10464759 |
PAV_r1.0 |
Name |
Pav_sc0000491.1 |
Position |
494746 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.494746A>C |
Amino Acid |
|
PCR |
Forward primer |
CCTACCCAATCCACATGAGC |
Reverse primer |
ACGCACTGGATTGGATCTTC |
Product size |
281 |
Enzymes for CAPS |
HaeIII |
Exp. fragment size (REF) |
281 |
Exp. fragment size (ALT) |
109,172 |
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
REF/ALT |
Benishuho |
REF/REF |
Benitemari |
REF/REF |
Beniyutaka |
REF/REF |
Nanyo |
REF/ALT |
Satonishiki |
REF/ALT |