| SNP | Name | Pav_sc0000488.1_295454M |
|---|---|---|
| REF | C | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 14253238 | |
| PAV_r1.0 | Name | Pav_sc0000488.1 |
| Position | 295454 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000488.1_g640.1.mk |
| Annotation | PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.607-65G>T | |
| Amino Acid | ||
| PCR | Forward primer | AAGTGGGTTGTGAATCCCAG |
| Reverse primer | TGGTCAATCTTTTGTGTTGGG | |
| Product size | 295 | |
| Enzymes for CAPS | AluI | |
| Exp. fragment size (REF) | 130,24,141 | |
| Exp. fragment size (ALT) | 130,165 | |
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/REF |
| Nanyo | -/- |
| Satonishiki | REF/REF |