| SNP | Name | Pav_sc0000488.1_15768Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 14532924 | |
| PAV_r1.0 | Name | Pav_sc0000488.1 |
| Position | 15768 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000488.1_g030.1.mk |
| Annotation | hypothetical protein POPTR_0014s16790g | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.238T>C | |
| Amino Acid | p.Trp80Arg | |
| PCR | Forward primer | GGCCAGAGGAGGATGGTACT |
| Reverse primer | GAGCTTCCTCATGGTTCGAC | |
| Product size | 230 | |
| Enzymes for CAPS | MspI | |
| Exp. fragment size (REF) | 230,0 | |
| Exp. fragment size (ALT) | 146,84,0 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |