SNP Information
SNP |
Name |
Pav_sc0000481.1_66060S |
REF |
C |
ALT |
G |
Chromosome |
Name |
PAV_r1.0chr4 |
Position |
5580707 |
PAV_r1.0 |
Name |
Pav_sc0000481.1 |
Position |
66060 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.66060C>G |
Amino Acid |
|
PCR |
Forward primer |
GGGGAGTGTGTGAGTTTGCT |
Reverse primer |
TACATGCAGTCTTTGCTGGC |
Product size |
292 |
Enzymes for CAPS |
MboI |
Exp. fragment size (REF) |
125,167 |
Exp. fragment size (ALT) |
292 |
References |
|
Germplasm List
Benikirari |
ALT/ALT |
Benisayaka |
REF/ALT |
Benishuho |
REF/ALT |
Benitemari |
ALT/ALT |
Beniyutaka |
REF/ALT |
Nanyo |
REF/ALT |
Satonishiki |
REF/ALT |