| SNP | Name | Pav_sc0000481.1_25143K |
|---|---|---|
| REF | G | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 5621624 | |
| PAV_r1.0 | Name | Pav_sc0000481.1 |
| Position | 25143 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000481.1_g040.1.mk |
| Annotation | PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.58C>A | |
| Amino Acid | p.Arg20Arg | |
| PCR | Forward primer | TGTTGAAGGCAGCAATTGAG |
| Reverse primer | CATTCTGCTCTGCTGTGAGC | |
| Product size | 310 | |
| Enzymes for CAPS | MspI | |
| Exp. fragment size (REF) | 30,66,44,170 | |
| Exp. fragment size (ALT) | 30,66,214 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |