| SNP | Name | Pav_sc0000481.1_25119Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 5621648 | |
| PAV_r1.0 | Name | Pav_sc0000481.1 |
| Position | 25119 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000481.1_g040.1.mk |
| Annotation | PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.82A>G | |
| Amino Acid | p.Thr28Ala | |
| PCR | Forward primer | TGTTGAAGGCAGCAATTGAG |
| Reverse primer | CATTCTGCTCTGCTGTGAGC | |
| Product size | 310 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |