| SNP | Name | Pav_sc0000474.1_154607W |
|---|---|---|
| REF | A | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr5 |
| Position | 1404650 | |
| PAV_r1.0 | Name | Pav_sc0000474.1 |
| Position | 154607 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000474.1_g280.1.br |
| Annotation | ||
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.220A>T | |
| Amino Acid | p.Thr74Ser | |
| PCR | Forward primer | GGTGGATGAAAAGTGCCAAG |
| Reverse primer | CAGCCTTTTTCTTCCCTCCT | |
| Product size | 340 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | ALT/ALT |
| Satonishiki | REF/REF |