SNP Information
SNP |
Name |
Pav_sc0000464.1_577891Y |
REF |
C |
ALT |
T |
Chromosome |
Name |
PAV_r1.0chr3 |
Position |
11683872 |
PAV_r1.0 |
Name |
Pav_sc0000464.1 |
Position |
577891 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.577891C>T |
Amino Acid |
|
PCR |
Forward primer |
ATCGTTTCCCCCTTTCAGTT |
Reverse primer |
TGCATAATCGGCAAGAAACA |
Product size |
227 |
Enzymes for CAPS |
MspI |
Exp. fragment size (REF) |
125,102 |
Exp. fragment size (ALT) |
227 |
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
REF/REF |
Benishuho |
REF/REF |
Benitemari |
REF/ALT |
Beniyutaka |
REF/REF |
Nanyo |
REF/REF |
Satonishiki |
REF/REF |