| SNP | Name | Pav_sc0000449.1_196847S |
|---|---|---|
| REF | C | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 1159107 | |
| PAV_r1.0 | Name | Pav_sc0000449.1 |
| Position | 196847 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000449.1_g350.1.mk |
| Annotation | PREDICTED: pentatricopeptide repeat-containing protein At4g14850 | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.422G>C | |
| Amino Acid | p.Cys141Ser | |
| PCR | Forward primer | GTCGCAAGGTTTCTCTCAGG |
| Reverse primer | CAGCCCAATGACTTCACCTT | |
| Product size | 215 | |
| Enzymes for CAPS | EcoRV | |
| Exp. fragment size (REF) | 215 | |
| Exp. fragment size (ALT) | 108,107 | |
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |