| SNP | Name | Pav_sc0000431.1_77161K |
|---|---|---|
| REF | G | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr5 |
| Position | 4752060 | |
| PAV_r1.0 | Name | Pav_sc0000431.1 |
| Position | 77161 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000431.1_g130.1.mk |
| Annotation | PREDICTED: peroxidase 20 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.229-43C>A | |
| Amino Acid | ||
| PCR | Forward primer | CGACAACCTCAAATCCTCGT |
| Reverse primer | CAAATTTGCCGACTTTGGTT | |
| Product size | 269 | |
| Enzymes for CAPS | MboI | |
| Exp. fragment size (REF) | 142,127 | |
| Exp. fragment size (ALT) | 269 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/ALT |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/ALT |