| SNP | Name | Pav_sc0000410.1_165572Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 26750458 | |
| PAV_r1.0 | Name | Pav_sc0000410.1 |
| Position | 165572 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000410.1_g260.1.mk |
| Annotation | PREDICTED: uracil-DNA glycosylase | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.*4949-134T>C | |
| Amino Acid | ||
| PCR | Forward primer | GGGAAGTGAAATGGGATGTG |
| Reverse primer | GTGTACCCTCCTTACGCCAA | |
| Product size | 221 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | ALT/ALT |
| Benishuho | REF/ALT |
| Benitemari | -/- |
| Beniyutaka | REF/REF |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |