| SNP | Name | Pav_sc0000405.1_320617Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr3 |
| Position | 16389944 | |
| PAV_r1.0 | Name | Pav_sc0000405.1 |
| Position | 320617 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000405.1_g670.1.mk |
| Annotation | PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220 | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.454+157C>T | |
| Amino Acid | ||
| PCR | Forward primer | ACACCGTCCGTCCTCTATTG |
| Reverse primer | TTTGCTGGAGTGACTGTTGC | |
| Product size | 277 | |
| Enzymes for CAPS | ApaI | |
| Exp. fragment size (REF) | 163,114 | |
| Exp. fragment size (ALT) | 277 | |
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |