| SNP | Name | Pav_sc0000398.1_89858Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 15222470 | |
| PAV_r1.0 | Name | Pav_sc0000398.1 |
| Position | 89858 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000398.1_g200.1.mk |
| Annotation | PREDICTED: psbQ-like protein 2, chloroplastic | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.549C>T | |
| Amino Acid | p.Phe183Phe | |
| PCR | Forward primer | GCATTTGATCTCCTGGCAAT |
| Reverse primer | TAGGTTGCGTTGCTTCACAG | |
| Product size | 293 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/REF |
| Beniyutaka | REF/ALT |
| Nanyo | REF/REF |
| Satonishiki | REF/REF |