| SNP | Name | Pav_sc0000383.1_156744R |
|---|---|---|
| REF | G | |
| ALT | A | |
| Chromosome | Name | PAV_r1.0chr5 |
| Position | 15770713 | |
| PAV_r1.0 | Name | Pav_sc0000383.1 |
| Position | 156744 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000383.1_g310.1.mk |
| Annotation | PREDICTED: homeobox protein 2 | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.587C>T | |
| Amino Acid | p.Ala196Val | |
| PCR | Forward primer | TCCTTCCCTCAATTGGTCAC |
| Reverse primer | ATCACGACGGAGGAGAATTG | |
| Product size | 301 | |
| Enzymes for CAPS | HhaI | |
| Exp. fragment size (REF) | 221,80 | |
| Exp. fragment size (ALT) | 301 | |
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |