| SNP | Name | Pav_sc0000376.1_499994Y |
|---|---|---|
| REF | C | |
| ALT | T | |
| Chromosome | Name | PAV_r1.0chr4 |
| Position | 21855916 | |
| PAV_r1.0 | Name | Pav_sc0000376.1 |
| Position | 499994 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000376.1_g800.1.mk |
| Annotation | cinnamoyl-CoA reductase 1 | |
| snpEff | Effect | 3_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.*404C>T | |
| Amino Acid | ||
| PCR | Forward primer | TCCAAGGAGAAGGCAAAGAA |
| Reverse primer | GCATGAACACACTTGACTCTCAG | |
| Product size | 295 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | ALT/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | ALT/ALT |
| Satonishiki | REF/ALT |