SNP Information
SNP |
Name |
Pav_sc0000361.1_18158Y |
REF |
C |
ALT |
T |
Chromosome |
Name |
PAV_r1.0chr8 |
Position |
10671163 |
PAV_r1.0 |
Name |
Pav_sc0000361.1 |
Position |
18158 |
SSR |
motif |
|
Gene |
Name |
|
Annotation |
|
snpEff |
Effect |
intergenic_region |
Impact |
MODIFIER |
Codon |
n.18158C>T |
Amino Acid |
|
PCR |
Forward primer |
GCTATGAATTGGGCTCAACC |
Reverse primer |
TTTCACCAAACGAAACTCCA |
Product size |
220 |
Enzymes for CAPS |
AluI |
Exp. fragment size (REF) |
1,84,32,103 |
Exp. fragment size (ALT) |
1,84,135 |
References |
|
Germplasm List
Benikirari |
REF/ALT |
Benisayaka |
REF/REF |
Benishuho |
REF/ALT |
Benitemari |
REF/REF |
Beniyutaka |
REF/REF |
Nanyo |
REF/REF |
Satonishiki |
REF/ALT |