| SNP | Name | Pav_sc0000358.1_252152M |
|---|---|---|
| REF | A | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr5 |
| Position | 15033066 | |
| PAV_r1.0 | Name | Pav_sc0000358.1 |
| Position | 252152 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000358.1_g560.1.mk |
| Annotation | PREDICTED: pentatricopeptide repeat-containing protein PNM1, mitochondrial | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.976-133A>C | |
| Amino Acid | ||
| PCR | Forward primer | TGCCATAGTCAAGGAAACCC |
| Reverse primer | AGGGACCCATTTGAAGCTCT | |
| Product size | 343 | |
| Enzymes for CAPS | MboI | |
| Exp. fragment size (REF) | 153,10,58,122 | |
| Exp. fragment size (ALT) | 153,10,180 | |
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |