| SNP | Name | Pav_sc0000354.1_277299K |
|---|---|---|
| REF | T | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr1 |
| Position | 20386295 | |
| PAV_r1.0 | Name | Pav_sc0000354.1 |
| Position | 277299 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000354.1_g440.1.mk |
| Annotation | PREDICTED: probable polygalacturonase non-catalytic subunit JP650 | |
| snpEff | Effect | synonymous_variant |
| Impact | LOW | |
| Codon | c.735A>C | |
| Amino Acid | p.Thr245Thr | |
| PCR | Forward primer | GCGGATTGTTCTGGTTGTTT |
| Reverse primer | CAACCTCCGATTCAACTCGT | |
| Product size | 254 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |