| SNP | Name | Pav_sc0000348.1_342774S |
|---|---|---|
| REF | C | |
| ALT | G | |
| Chromosome | Name | PAV_r1.0chr7 |
| Position | 12690652 | |
| PAV_r1.0 | Name | Pav_sc0000348.1 |
| Position | 342774 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000348.1_g650.1.mk |
| Annotation | PREDICTED: putative B3 domain-containing protein Os03g0621600 | |
| snpEff | Effect | 3_prime_UTR_variant |
| Impact | MODIFIER | |
| Codon | c.*133C>G | |
| Amino Acid | ||
| PCR | Forward primer | CTTTTGAGCCATAGGCTTCC |
| Reverse primer | CTTAGCATTACCGGCCACAT | |
| Product size | 201 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | REF/ALT |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | -/- |
| Satonishiki | REF/REF |