| SNP | Name | Pav_sc0000348.1_295361Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr7 |
| Position | 12643239 | |
| PAV_r1.0 | Name | Pav_sc0000348.1 |
| Position | 295361 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000348.1_g610.1.mk |
| Annotation | PREDICTED: B3 domain-containing protein Os03g0212300-like | |
| snpEff | Effect | missense_variant |
| Impact | MODERATE | |
| Codon | c.1540T>C | |
| Amino Acid | p.Tyr514His | |
| PCR | Forward primer | GCAACCCTAATGAGGTCAGG |
| Reverse primer | ATTGTCCTTCACAAATGCCC | |
| Product size | 289 | |
| Enzymes for CAPS | ||
| Exp. fragment size (REF) | ||
| Exp. fragment size (ALT) | ||
| References | ||
| Benikirari | -/- |
|---|---|
| Benisayaka | REF/ALT |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | ALT/ALT |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |