| SNP | Name | Pav_sc0000323.1_372954Y |
|---|---|---|
| REF | T | |
| ALT | C | |
| Chromosome | Name | PAV_r1.0chr6 |
| Position | 5967164 | |
| PAV_r1.0 | Name | Pav_sc0000323.1 |
| Position | 372954 | |
| SSR | motif | |
| Gene | Name | Pav_sc0000323.1_g760.1.mk |
| Annotation | PREDICTED: vacuolar proton ATPase a1-like | |
| snpEff | Effect | intron_variant |
| Impact | MODIFIER | |
| Codon | c.-1841+294A>G | |
| Amino Acid | ||
| PCR | Forward primer | TTATGCCCCTTCAACTTTGG |
| Reverse primer | GGTGTCTGGATTTGCTCCAT | |
| Product size | 258 | |
| Enzymes for CAPS | HhaI | |
| Exp. fragment size (REF) | 258 | |
| Exp. fragment size (ALT) | 176,82 | |
| References | ||
| Benikirari | REF/REF |
|---|---|
| Benisayaka | REF/REF |
| Benishuho | REF/REF |
| Benitemari | REF/ALT |
| Beniyutaka | REF/REF |
| Nanyo | REF/ALT |
| Satonishiki | REF/REF |